WHO/TDR

Introduction to Bioinformatics
Jan 31-Feb 4, 2005; Feb 21-25, 2005
Trường Ðại học Y dược TP. Hồ Chí Minh
(The University of Medicine & Pharmacy at Hochiminh City)
Ho Chi Minh City, VietNam

MRTC

Supplemental Printed Reading Packet: Introduction to Bioinformatics

Last Updated: Thursday, March 3, 2005 2:14 PM (EST)

Introduction to Bioinformatics [To schedule]

  1. NCBI Resources: Wheeler DL, Church DM, Edgar R, Federhen S, Helmberg W, Madden TL, Pontius JU, Schuler GD, Schriml LM, Sequeira E, Suzek TO, Tatusova TA, Wagner L. 2004 Database resources of the National Center for Biotechnology Information: update. Nucleic Acids Res. 2004 Jan 1;32 Database issue:D35-40. [local - pdf]
  2. NCBI News: Summer/Fall 2004: http://www.ncbi.nlm.nih.gov/Web/Newsltr/SummerFall04/sumfall04.pdf [Local - pdf]
  3. NCBI News: Spring 2004: http://www.ncbi.nlm.nih.gov/Web/Newsltr/Spring04/Spring04.pdf [Local -pdf]
  4. NCBI News: Fall 2003/Winter 2004: http://www.ncbi.nlm.nih.gov/Web/Newsltr/FallWinter03/fallwinter03.pdf [Local - pdf]
  5. NCBI Field Guide Exercises ftp://ftp.ncbi.nlm.nih.gov/pub/FieldGuide/NCBI_exercises.pdf [Local -pdf]
  6. Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins, Third Edition, Ed. A.D. Baxevanis and B.F. F. Ouellette. 2005: Chapter 1: Sequence Databases (pg 4-24) R. Apweiler.
  7. Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins, Third Edition, Ed. A.D. Baxevanis and B.F. F. Ouellette. 2005: Chapter 2: Mapping Databases (pg 26-54) P.S. White and T.C. Matise.
  8. Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins, Third Edition, Ed. A.D. Baxevanis and B.F. F. Ouellette. 2005: Chapter 3: Information Retrieval from Biological Databases (pg 56-79) A.D. Baxevanis.
  9. Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins, Third Edition, Ed. A.D. Baxevanis and B.F. F. Ouellette. 2005: Chapter 4: Genomic Databases (pg 82-112) T.G.Wolfsberg.
  10. Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins, Third Edition, Ed. A.D. Baxevanis and B.F. F. Ouellette. 2005: Chapter 5: Predictive Methods Using DNA Sequences (pg 115-142) E. Blanco and R. Guigo.
  11. Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins, Third Edition, Ed. A.D. Baxevanis and B.F. F. Ouellette. 2005: Chapter 7: Sequence Polymorphisms (pg 172-193) J.C. Mullikin and S.T. Sherry.
  12. Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins, Third Edition, Ed. A.D. Baxevanis and B.F. F. Ouellette. 2005: Chapter 8: Predictive Methods Using Protein Sequences (pg 198-221) Y. Ofran and B Rost.
  13. Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins, Third Edition, Ed. A.D. Baxevanis and B.F. F. Ouellette. 2005: Chapter 9: Protein Structure Prediction and Analysis (pg 224-251) D. Wishart. [Self-Study]
  14. Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins, Third Edition, Ed. A.D. Baxevanis and B.F. F. Ouellette. 2005: Chapter 11: Assessing Pairwise Sequence Similarity: BLAST and FASTA (pg 296-324). A.D. Baxevanis.
  15. Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins, Third Edition, Ed. A.D. Baxevanis and B.F. F. Ouellette. 2005: Chapter 12: Creation and Analysis of Protein Multiple Sequence Alignments (pg 326-340) G.J. Barton. [Self-Study]
  16. Bioinformatics and Functional Genomics: Pevsner 2003: Chapter 12: Complete Genomes and the Tree of Life (pg 397-435)
  17. Bioinformatics and Functional Genomics: Pevsner 2003: Chapter 16: Eukaryotic Genomes: From Parasite to Primates (pg 539-604)
  18. Pre-course reading packet used for the WHO/TDR sponsored Regional Training Courses on Bioinformatics Applied to Tropical Diseases -- More Supplemental Pre-reading material.

Last updated: Thursday, March 3, 2005 2:14 PM (EST)